GitHub - CelVoxes/ceLLama: Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports
ceLLama
ceLLama is a streamlined automation pipeline for cell type annotations
using large-language models (LLMs).
Advantages:
Privacy: Operates locally, ensuring no data leaks.
Comprehensive Analysis: Considers negative genes.
Speed: Efficient processing.
Extensive Reporting: Generates customized reports.
ceLLama is ideal for quick and preliminary cell type checks!
NoteCheck the tutorial for Scanpy example.
Installation
To install ceLLama, use the following command:
devtools::install_github("Ce...
Read more at github.com